I cannot put a "." in the file name because Mac doesn't allow it. It says that a file that starts with a dot is an invisible file and there is no way I can do it, its only for special files of the system. Thanks, Isabel
From: bat...@gmail.com Date: Wed, 17 Jun 2015 06:58:03 -1000 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] tksurfer Dear Isabel, the “.” is part of the name of the file, that is why the system cannot find it. Hope this helps, Rodolphe. `·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·Rodolphe Nenert, Ph.D.Department of Neurology312 Civitan International Research Center1719 6th avenue southBirmingham, AL, 35294-0021 Office: 205.975.3885Mob: 205.566.3854Web: http://www.rnenert.org`·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.· On Jun 17, 2015, at 4:05 AM, isabel martinez tejada <isa_martinez...@hotmail.com> wrote:Dear experts, I am using a Mac that runs bash shell. I have performed a group analysis and would like to visualize the results. When using tksurfer I come up with a license error. The lines of commands I am running are: export FREESURFER_HOME=/Applications/freesurfersource $FREESURFER_HOME/SetUpFreeSurfer.sh export SUBJECTS_DIR=/Users/IsabelMartinez/Documents/group1echo $SUBJECTS_DIRcd $SUBJECTS_DIR tksurfer fsaverage lh inflated \ -annot aparc.annot -fthresh 2 \ -overlay lh.gender.glmdir/Contrast1/sig.mgh The error I get is the following: FreeSurfer license file /Applications/freesurfer/.license not found I have a license.txt (without the dot at the beginning) stored in that folder, so I don't know what the problem is. Thank you for your attention, Isabel_______________________________________________Freesurfer mailing listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurferThe information in this e-mail is intended only for the person to whom it isaddressed. If you believe this e-mail was sent to you in error and the e-mailcontains patient information, please contact the Partners Compliance HelpLine athttp://www.partners.org/complianceline . If the e-mail was sent to you in errorbut does not contain patient information, please contact the sender and properlydispose of the e-mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
