Dear Isabel, the “.” is part of the name of the file, that is why the system cannot find it.
Hope this helps, Rodolphe. `·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.· Rodolphe Nenert, Ph.D. Department of Neurology 312 Civitan International Research Center 1719 6th avenue south Birmingham, AL, 35294-0021 Office: 205.975.3885 Mob: 205.566.3854 Web: http://www.rnenert.org <http://www.rnenert.org/> `·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.·´´¯``·.¸¸.· > On Jun 17, 2015, at 4:05 AM, isabel martinez tejada > <isa_martinez...@hotmail.com> wrote: > > Dear experts, > > I am using a Mac that runs bash shell. I have performed a group analysis and > would like to visualize the results. When using tksurfer I come up with a > license error. > > The lines of commands I am running are: > export FREESURFER_HOME=/Applications/freesurfer > source $FREESURFER_HOME/SetUpFreeSurfer.sh > > export SUBJECTS_DIR=/Users/IsabelMartinez/Documents/group1 > echo $SUBJECTS_DIR > cd $SUBJECTS_DIR > > > tksurfer fsaverage lh inflated \ > -annot aparc.annot -fthresh 2 \ > -overlay lh.gender.glmdir/Contrast1/sig.mgh > > The error I get is the following: > FreeSurfer license file /Applications/freesurfer/.license not found > > I have a license.txt (without the dot at the beginning) stored in that > folder, so I don't know what the problem is. > > Thank you for your attention, > > Isabel > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline > <http://www.partners.org/complianceline> . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
