Hi Amolie
you only want a single -i <dicom file> for each entire T1-weighted run that
you acquired, NOT for every file in that run. Thus if you got a single
8-minute scan you should only have one -i on your recon-all command line
cheers
Bruce
On Tue, 19 May 2015, nellie wrote:
Dear Lee,
Greatly appreciate for your advice. But I not sure whether it is the reason
for the comand killed.
Actually, I had used the method, useing the -i flag for each .dcm file f
or your training data of “014-anon” and then running the comand “recon-all -
s 014-anon -all”, to get a final result. But it didn’t work when it came to
my subject’s data. I wonder if the problem come from the size of my subject’
s mri scan? Because I found that the size of 014-anon was 21MB, and that of
my data was 61MB. Do I need to reduce the size of my data by shrinking the M
RI picture? Maybe the memory of my PC can’t support the operation? But the r
eal memory and the virtual memory of my PC is 16G and 32G respectively, whic
h is beyond the basic requirement of Freesurfer.
Hoping for your reply. Thanks a lot!
Amolie
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