I am having some trouble using this version- when I try to use it in Terminal, it returns "Permission denied." Is there something I need to do to be able to use it on my computer? Thanks for your help.
On Mon, Apr 20, 2015 at 1:50 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu> wrote: > > This is the most recent version, the one that will be part of FS version > 6. > > > On 4/20/15 1:40 PM, Dan Goldman wrote: > > Hi Douglas, > > Thank you for the quick response. > Could you tell me which version of optseq this is? Are there multiple > versions of optseq2? > > On Mon, Apr 20, 2015 at 1:31 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu> > wrote: > >> >> Can you try using this version of optseq? >> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/optseq2 >> >> I changed some things that might fix this problem. I ran the command line >> below with it, and it gave reasonable results for the last null. >> >> >> On 4/20/15 1:22 PM, Dan Goldman wrote: >> >> Hello, >> >> I am having a problem with optseq2, where the final NULL event is given >> a much longer duration than the rest of the events. This happens even if I >> set tnullmax to a lower number- for example, I set tnullmax to 10 seconds, >> and the final interval came out at 48 seconds. Do you know how to resolve >> this issue? >> >> Here are the settings I used: >> >> ./optseq2 --ntp 684 --tr 2 --psdwin 0 22 --tnullmin 4 --tnullmax 10 --ev >> MTS 12 6 --ev MFS 12 6 --ev MTNs 12 6 --ev MFNs 12 6 --ev RTSE 12 6 --ev >> RTNsE 12 6 --ev RFSE 12 6 --ev RFNsE 12 6 --ev RFSH 12 12 --ev RFNsH 12 12 >> --ev IT 12 4 --nsearch 1000 --nkeep 1 >> >> Thank you, >> >> Dan >> >> >> _______________________________________________ >> Freesurfer mailing >> listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to whom it >> is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. >> >> > > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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