Hi Santosh when you say " XYZ coordinates information", what coordinate system do you mean? You can certainly load the surface (white or pial) and the annot into matlab and get the surface ras coords that way.
cheers Bruce On Thu, 19 Mar 2015, Santosh Yadav wrote: > Dear FreeSurfer Experts, > Can any one please guide me how to get the XYZ coordinates information of > both left and right ROIs included in lh.aparc.a2009.thickness.stats.dat, > that have 74 ROIs (below), these ROI I got after Qdec in the state_table > folder. > > lh_G_and_S_frontomargin_thickness > lh_G_and_S_occipital_inf_thickness > lh_G_and_S_paracentral_thickness > lh_G_and_S_subcentral_thickness > lh_G_and_S_transv_frontopol_thickness > lh_G_and_S_cingul-Ant_thickness > lh_G_and_S_cingul-Mid-Ant_thickness > lh_G_and_S_cingul-Mid-Post_thickness > lh_G_cingul-Post-dorsal_thickness > lh_G_cingul-Post-ventral_thickness > lh_G_cuneus_thickness > lh_G_front_inf-Opercular_thickness > lh_G_front_inf-Orbital_thickness > lh_G_front_inf-Triangul_thickness > lh_G_front_middle_thickness > lh_G_front_sup_thickness > lh_G_Ins_lg_and_S_cent_ins_thickness > lh_G_insular_short_thickness > lh_G_occipital_middle_thickness > lh_G_occipital_sup_thickness > lh_G_oc-temp_lat-fusifor_thickness > lh_G_oc-temp_med-Lingual_thickness > lh_G_oc-temp_med-Parahip_thickness > lh_G_orbital_thickness > lh_G_pariet_inf-Angular_thickness > lh_G_pariet_inf-Supramar_thickness > lh_G_parietal_sup_thickness > lh_G_postcentral_thickness > lh_G_precentral_thickness > lh_G_precuneus_thickness > lh_G_rectus_thickness > lh_G_subcallosal_thickness > lh_G_temp_sup-G_T_transv_thickness > lh_G_temp_sup-Lateral_thickness > lh_G_temp_sup-Plan_polar_thickness > lh_G_temp_sup-Plan_tempo_thickness > lh_G_temporal_inf_thickness > lh_G_temporal_middle_thickness > lh_Lat_Fis-ant-Horizont_thickness > lh_Lat_Fis-ant-Vertical_thickness > lh_Lat_Fis-post_thickness > lh_Pole_occipital_thickness > lh_Pole_temporal_thickness > lh_S_calcarine_thickness > lh_S_central_thickness > lh_S_cingul-Marginalis_thickness > lh_S_circular_insula_ant_thickness > lh_S_circular_insula_inf_thickness > lh_S_circular_insula_sup_thickness > lh_S_collat_transv_ant_thickness > lh_S_collat_transv_post_thickness > lh_S_front_inf_thickness > lh_S_front_middle_thickness > lh_S_front_sup_thickness > lh_S_interm_prim-Jensen_thickness > lh_S_intrapariet_and_P_trans_thickness > lh_S_oc_middle_and_Lunatus_thickness > lh_S_oc_sup_and_transversal_thickness > lh_S_occipital_ant_thickness > lh_S_oc-temp_lat_thickness > lh_S_oc-temp_med_and_Lingual_thickness > lh_S_orbital_lateral_thickness > lh_S_orbital_med-olfact_thickness > lh_S_orbital-H_Shaped_thickness > lh_S_parieto_occipital_thickness > lh_S_pericallosal_thickness > lh_S_postcentral_thickness > lh_S_precentral-inf-part_thickness > lh_S_precentral-sup-part_thickness > lh_S_suborbital_thickness > lh_S_subparietal_thickness > lh_S_temporal_inf_thickness > lh_S_temporal_sup_thickness > lh_S_temporal_transverse_thickness > With best, > > Santosh > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
