Hi Santosh

when you say " XYZ coordinates information", what coordinate system do 
you mean? You can certainly load the surface (white or pial) and the annot 
into matlab and get the surface ras coords that way.

cheers
Bruce

On Thu, 19 Mar 2015, Santosh 
Yadav wrote:

> Dear FreeSurfer Experts,
> Can any one please guide me how to get the XYZ coordinates information of
> both left and right ROIs included in lh.aparc.a2009.thickness.stats.dat,
> that have 74 ROIs (below), these ROI I got after Qdec in the state_table
> folder.
> 
> lh_G_and_S_frontomargin_thickness
> lh_G_and_S_occipital_inf_thickness
> lh_G_and_S_paracentral_thickness
> lh_G_and_S_subcentral_thickness
> lh_G_and_S_transv_frontopol_thickness
> lh_G_and_S_cingul-Ant_thickness
> lh_G_and_S_cingul-Mid-Ant_thickness
> lh_G_and_S_cingul-Mid-Post_thickness
> lh_G_cingul-Post-dorsal_thickness
> lh_G_cingul-Post-ventral_thickness
> lh_G_cuneus_thickness
> lh_G_front_inf-Opercular_thickness
> lh_G_front_inf-Orbital_thickness
> lh_G_front_inf-Triangul_thickness
> lh_G_front_middle_thickness
> lh_G_front_sup_thickness
> lh_G_Ins_lg_and_S_cent_ins_thickness
> lh_G_insular_short_thickness
> lh_G_occipital_middle_thickness
> lh_G_occipital_sup_thickness
> lh_G_oc-temp_lat-fusifor_thickness
> lh_G_oc-temp_med-Lingual_thickness
> lh_G_oc-temp_med-Parahip_thickness
> lh_G_orbital_thickness
> lh_G_pariet_inf-Angular_thickness
> lh_G_pariet_inf-Supramar_thickness
> lh_G_parietal_sup_thickness
> lh_G_postcentral_thickness
> lh_G_precentral_thickness
> lh_G_precuneus_thickness
> lh_G_rectus_thickness
> lh_G_subcallosal_thickness
> lh_G_temp_sup-G_T_transv_thickness
> lh_G_temp_sup-Lateral_thickness
> lh_G_temp_sup-Plan_polar_thickness
> lh_G_temp_sup-Plan_tempo_thickness
> lh_G_temporal_inf_thickness
> lh_G_temporal_middle_thickness
> lh_Lat_Fis-ant-Horizont_thickness
> lh_Lat_Fis-ant-Vertical_thickness
> lh_Lat_Fis-post_thickness
> lh_Pole_occipital_thickness
> lh_Pole_temporal_thickness
> lh_S_calcarine_thickness
> lh_S_central_thickness
> lh_S_cingul-Marginalis_thickness
> lh_S_circular_insula_ant_thickness
> lh_S_circular_insula_inf_thickness
> lh_S_circular_insula_sup_thickness
> lh_S_collat_transv_ant_thickness
> lh_S_collat_transv_post_thickness
> lh_S_front_inf_thickness
> lh_S_front_middle_thickness
> lh_S_front_sup_thickness
> lh_S_interm_prim-Jensen_thickness
> lh_S_intrapariet_and_P_trans_thickness
> lh_S_oc_middle_and_Lunatus_thickness
> lh_S_oc_sup_and_transversal_thickness
> lh_S_occipital_ant_thickness
> lh_S_oc-temp_lat_thickness
> lh_S_oc-temp_med_and_Lingual_thickness
> lh_S_orbital_lateral_thickness
> lh_S_orbital_med-olfact_thickness
> lh_S_orbital-H_Shaped_thickness
> lh_S_parieto_occipital_thickness
> lh_S_pericallosal_thickness
> lh_S_postcentral_thickness
> lh_S_precentral-inf-part_thickness
> lh_S_precentral-sup-part_thickness
> lh_S_suborbital_thickness
> lh_S_subparietal_thickness
> lh_S_temporal_inf_thickness
> lh_S_temporal_sup_thickness
> lh_S_temporal_transverse_thickness
> With best,
> 
> Santosh
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