I'm not sure what you mean. optimal in what sense?
doug

On 03/03/2015 03:21 PM, Hirsch, Gabriella wrote:
> Hi Fs experts,
>
> I had a quick question about settings thresholds of surface overlays 
> in Tksurfer. I am currently generating images of the thickness, volume 
> and surface area of individual subjects, and would like to know if 
> there are optimal minimum and maximum threshold values to be set for 
> different surfaces. For example, when overlaying thickness (from 
> /surf/?h.thickness), I have set the min threshold to 1 or 1.3 (see 
> attached); however I'm not sure this same threshold holds up in the 
> other surfaces (e.g. surface area).
>
> In summary, is there an optimal way to determine what this min. and 
> max. threshold should be in function of the distribution displayed in 
> the threshold window (see attached, on the left)?
>
> Thank you!
>
> Gabriella
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to