Can you send your fsgd file? On 02/21/2015 08:42 AM, Anders Hougaard wrote: > Dear Freesurfers, > > Sorry for this newbie question: > I'm preparing my data for a group analysis using mris_preproc: > > mris_preproc --fsgd nocov.fsgd --target fsaverage --hemi lh --meas > thickness --out lh.nocov.thickness.00.mgh > > I have 120 subjects in total and my FSGD file simply looks like this > > GroupDescriptorFile 1 > Class Group1 > Class Group2 > Input pt01 Group1 > Input pt02 Group1 > [..rest of lines left out..] > Input ct01 Group2 > Input ct02 Group2 > [..rest of lines left out..] > > > When I run mris_preproc, the program only assembles the first two > subjects in group 1 and the first subject in group 2, i.e. 3 subjects > not 120. > > I have run -make all on all subjects and there is nothing to make. > I'm running ver. 5.3.0 > > What is wrong? > > All the best, > Anders > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >
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