Use 10 for thalamus and not 9. Not sure why there is a difference.
doug

On 01/08/2015 02:57 PM, std...@virgilio.it wrote:
>
> Hi list,
>
>
> I'm running FAST on resting state data.
>
>
> After
>
>
> fcseed-config -segid 9 -fcname L_Thalamus.dat -fsd rest -mean -cfg 
> mean.L_Thalamus.config
>
>
> and
>
>
> fcseed-sess -s Sess01 -cfg mean.L_Thalamus.config
>
>
> gives this error:
>
>
>
> Loading 
> /Applications/freesurfer/subjects/FUNCTIONAL_DATA/Sess01/rest/001/tmp.fcseed-sess.55885/mask.nii.gz
>
> Loading 
> /Applications/freesurfer/subjects/FUNCTIONAL_DATA/Sess01/rest/001/fmcpr.nii.gz
>
> Voxel Volume is 64.5752 mm^3
>
> Generating list of segmentation ids
>
> Found   1 segmentations
>
> Computing statistics for each segmentation
>
>   0   1                                          0       0.000
>
> MRIalloc(0, 1, 1): bad parm
>
>
> Reporting on   0 segmentations
>
> Computing spatial average of each frame
>
>
> Writing to 
> /Applications/freesurfer/subjects/FUNCTIONAL_DATA/Sess01/rest/001/tmp.fcseed-sess.55885/avgwf.mgh
>
> Segmentation fault
>
>
>
> Thanks in advance,
>
>
>
> Stefano
>
>
>
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-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
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Fax: 617-726-7422

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