This is a plain text file, yes.
On Wed, 7 Jan 2015, Giovanni de Marco wrote:
Please, Could you tell me if this file is better ? I used textwrangler on Imac 2015-01-07 22:36 GMT+01:00 Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>: Great, then copy these values into a new plain text file (not rich text format), run it through tracula, and let us know what you get. To give you any idea of what I see when I run more on the diffusion60directions.txt that you attached: % more diffusion60directions.txt "diffusion60directions.txt" may be a binary file. See it anyway? book^@^@^@^@mark^@^@^@^@8^@^@^@8^@^@^@D9^F^@^@^@^D^P^@^@^@^@^@a^@^@5_ñt¸\ºA^@^@ ^@^@ÿ^?^@^@X8^F^@^D^@^@^@^C^C^@^@^@^D^@^@^L^@^@^@^A^A^@^@Applications ^@^@^@^A^A^@^@freesurfer^@^@^H^@^@^@^A^A^@^@subjects^G^@^@^@^A^A^@^@gaitals^@^Y ^@^@^@^A^A^@^@diffusion60directions.txt^@^@^@^T^@^@^@^A^F^@^@^P^@^@^@$^@^@^@8^@ ^@^@H^@^@^@X^@^@^@^H^@^@^@^D^C^@^@“9$^@^@^@^@^@^H^@^@^@^D^C^@^@ì^D1^@^@^@^@^@^H ^@^@^@^D^C^@^@©%2^@^@^@^@^@^H^@^@^@^D^C^@^@E^V:^@^@^@^@^@^H^@^@^@^D^C^@^@;Œ6^@^@^@^@^@^T^@^ @^@^A^F^@^@˜^@^@^@¨^@^@^@¸^@^@^@È^@^@^@Ø^@^@^@^H^@^@^@^@^D^@^@A.y^@^@^@^X^@^@^@^A^B^@^@^A^@ ^@^@^@^@^@^@^_^B^@^@^@^@^@^@^_^B^@^@^@^@^@^@^@^@^@^@^A^E^@^@^H^@^@^@^A ^@^@file:///^L^@^@^@^A^A^@^@MacintoshH^@^@^@^D^C^@^@^@€œè^@^@^@^H^@^@^@^@^D^@^@A¹^±Æ^@^@^@$^@^@^@^A^A^@^@E7566EA3-C427-3CD3-93B D-A1F59AF64343^X^@^@^@ On Wed, 7 Jan 2015, Giovanni de Marco wrote: Actually I use this gradient file (diffusion60directions.txt) below with Trackvis and everything is fine. 0 0 0 -0.164494 0.018226 0.98621 -0.190456 0.462978 -0.865666 -0.730086 0.629388 0.266169 -0.613388 -0.746602 0.257566 0.306915 0.919394 -0.246004 0.317328 -0.847873 0.424753 0.965395 0.127917 0.227264 -0.049691 -0.527795 -0.847917 0.207666 -0.97417 -0.088703 -0.737567 -0.673497 -0.048958 -0.237888 0.330251 0.913424 -0.438285 -0.492274 0.752046 0 0 0 0.399147 0.037209 0.916132 -0.463775 0.588699 -0.662078 -0.706111 0.10558 -0.700186 0.721691 -0.408589 0.558763 0.614018 0.500213 0.610548 -0.012408 -0.941819 -0.335892 0.152342 0.987393 0.042982 -0.538071 0.653574 0.532278 0.033139 0.778743 0.626467 0.936281 -0.140182 -0.322068 -0.612455 -0.210117 -0.762069 0.674572 0.218058 -0.705268 0 0 0 -0.339374 -0.684242 -0.645475 -0.494112 0.845667 0.201743 0.472146 -0.289458 0.832641 -0.842214 -0.474515 0.255951 0.077797 -0.973101 0.216848 0.121406 0.359531 -0.925202 -0.816364 -0.460748 -0.348226 0.505147 -0.102942 -0.856872 0.624079 -0.684413 0.376968 0.158319 -0.724422 0.67093 -0.474079 -0.878731 -0.055503 0.102353 0.211942 0.971908 0 0 0 0.898924 -0.155384 0.409623 -0.405292 -0.747871 0.525763 0.904768 -0.410581 -0.113222 -0.982422 -0.127045 0.136774 -0.447504 0.884214 -0.133813 -0.862671 0.445789 -0.238897 -0.279017 0.842797 0.460264 -0.546017 0.395479 0.738554 -0.595501 -0.720978 -0.354358 0.783099 -0.387266 -0.486601 0.147511 0.645045 -0.749772 0.403084 0.197286 -0.893645 0 0 0 -0.985485 0.157362 -0.063694 -0.35289 -0.402766 -0.84454 0.766668 -0.095163 -0.634952 -0.265955 0.620056 0.738104 0.078023 0.870617 -0.485736 0.833015 0.17549 0.524681 -0.720578 0.690754 -0.060215 0.917014 0.396014 0.047526 -0.140148 0.147395 -0.979098 0.314193 0.876563 0.364581 0.874324 0.190397 -0.446439 -0.677724 -0.514302 0.525532 0 0 0 2015-01-07 22:21 GMT+01:00 Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>: I can see what the name of the file is, but try running "more" on it or opening it with a text editor. On Wed, 7 Jan 2015, Giovanni de Marco wrote: Format txt 2015-01-07 22:08 GMT+01:00 Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>: This is not a plain text file. What format is it in? On Wed, 7 Jan 2015, Giovanni de Marco wrote: it looks like thats in attached file 2015-01-07 21:55 GMT+01:00 Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>: What does the gradient table look like? Based on these errors, it may not like that there is no 0 before the decimal point: printf: -.999989: expected numeric value printf: -.004202: expected numeric value printf: -.001857: expected numeric value On Wed, 7 Jan 2015, Giovanni de Marco wrote: I don't know if you received the zipped log files ? (I received an error message) I send you the most recent log files. See you then Giovanni 2015-01-07 20:57 GMT+01:00 Giovanni de Marco <demarco.giova...@gmail.com>: Please be advised, This message contained one or more of the following prohibited file types: (.zip,.bat,.exe,.pif,.scr). The file(s) have been automatically removed from the message, in order to protect the privacy of our patients and employees, and to protect the integrity of our systems and data. As a security measure to prevent potential viruses and malware, Partners prohibits the receipt of attached files that have the potential to execute malicious code. You should contact the sender, and if you are sure that the original attached file(s) are safe, please use the Partners Secure File Transfer system, https://transfer.partners.org to work with the sender to securely transfer the removed attachment(s). If you do not have an account on the Partners Secure File Transfer System, please register for an account by using the following steps: 1. Go to https://transfer.partners.org 2. Click on "I don't have an account yet" 3. Enter your email address and click “Register” 4. You will receive an email with final instructions More information can be found at http://rc.partners.org/sFTP (Partners login required) If you have any questions or issues please enter a ticket in ServiceNow or call your Service Desk. **** Original message follows **** I found all these log files. Le 7 janv. 2015 à 17:25, Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu> a écrit : trac-all.log A MIME attachment of type <application/zip> was removed here by a drop-attachments-by-filetype filter rule on the host <Phsmgmx17.partners.org>. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Tel: +33 (0) 6 74 61 01 65 demarco.giova...@gmail.com _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Tel: +33 (0) 6 74 61 01 65 demarco.giova...@gmail.com _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Tel: +33 (0) 6 74 61 01 65 demarco.giova...@gmail.com _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Tel: +33 (0) 6 74 61 01 65 demarco.giova...@gmail.com _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. -- Tel: +33 (0) 6 74 61 01 65 demarco.giova...@gmail.com
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.