I think just the ?h.white and ?h.pial

cheers
Bruce
On Tue, 9 Dec 2014, Xiaomin Yue wrote:

What I mean by inputs is the default files the mris_thickness will be
looking for to run correctly 

Xiaomin 


On Dec 9, 2014, at 1:08 PM, Xiaomin Yue <yu...@hotmail.com> wrote:

      Hi Bruce,

      Thanks for your response.  What's the inputs to the
      mris_thickness?  I need the wm.mgz to generate the ratio of gray
      vs. white matter. 

      Xiaomin

      Date: Tue, 9 Dec 2014 09:55:21 -0500
      From: fis...@nmr.mgh.harvard.edu
      To: freesurfer@nmr.mgh.harvard.edu
      Subject: Re: [Freesurfer] thickness from pial and white

the thickness you can generate using mris_thikness. Why do you want to generate a wm.mgz? I guess you could from the wmparc

On Mon, 8 Dec 2014, Xiaomin Yue wrote:

> > Hi All, > >   > > Cortical surface reconstructed using caret from a high resolution MRI data
> (0.25 mm) has been converted to freesurfer format, and viewed correctly
> using freeview.  My questions are whether it is possible to generate 1) a
> ?h.thickness from the ?h.pial and ?h.white; 2) wm.mgz file using ?h.pial a
nd
> ?h.white
> >   > > Thanks very much for your inputs. > > > Xiaomin > > >

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