thank you much for your replay, but i am not sure how to use "spmregister" or "fslregister" for this purpose, becouse i want to get my MNI ROI's into the subject space, and i only have the transeformation from the subject space to the MNI space (instead of the inverse- from MNI space to the subject space). thanks roy
2014-09-29 18:08 GMT+03:00 Douglas N Greve <gr...@nmr.mgh.harvard.edu>: > > You need to create a registration between your subject and your MNI > space. Try using spmregister or fslregister (but not bbregister). But > there is a bigger problem in that surface-sampling of ROIs in MNI space > tends not to do very well, but I'll leave that up to you to evaluate > > > On 09/29/2014 04:03 AM, Roy Talman wrote: > > Hello > > I have a segmentation which made on MNI space, is it possible to do > > the inverse transform to the segmentation from MNI space to each > > subject space? > > does the size of the MNI segmentation (218*182*182) should be a problam? > > I was traing : > > mri_vol2surf MNI_Segmentation.nii --hemi lh --regheader bert --o > > /home/cnilab/ProgramFiles/freesurfer/NewFileName.mgz > > but i get a empty file. > > is there a diffrante way to do this? > > > > thanks. > > roy > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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