Hi Leise, please copy the list on all emails. Thanks. You can use the matlab textread command (specify to use # as the comment) doug
On 10/03/2014 02:48 AM, Leise Borg wrote: > > Hi Douglas > > Thanks a lot for your answer. I will definitely do that. Can you tell > me how I load this aseg.stats file into Matlab? I do not have > FreeSurfer downloaded on my own computer. Do I need that to load this > file? > > -Leise. > > Why not just use the values in aseg.stats? > > On 10/01/2014 07:44 AM, Leise Borg wrote: > > > > > > Hi FreeSurfer > > > > > > I am working on a project concerning Alzheimer’s patients and I need > > > to know the positions of white matter (WM) and white matter lesions > > > (WML) from your segmentations. > > > > > > To find the WML, I use label 77 in the aparc.a2009s+aseg.mgz-files. > > > > > > To find the WM, I use labels 2 and 41 in the ribbon.mgz-files and > > > subtract the ventricles by subtracting labels: 4, 5 14, 15, 43 44 > > > found in the aseg.mgz-files. > > > > > > However, in the two sets of positions – one for WML and one for WM > > > –there is an overlap. It is not big, but it is there. > > > > > > Can you help me finding the true WML- and WM-segmentations? > > > > > > With kind regards, Leise. > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
