Check out this page http://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems
This might also be useful http://surfer.nmr.mgh.harvard.edu/fswiki/FsAnat-to-NativeAnat On 07/30/2014 08:12 PM, Krieger, Donald N. wrote: > > Thanks for the helpful responses to the previous questions, Bruce. > > It’s great to not stay stuck for long. > > Here’s another. > > I am working with voxels in the original MRI coordinate system. > > It appears that voxel and vertex coordinates in freesurfer are > transformed to a 1 mm x 256^3 volume. > > Is there a tool to transform these back to MRI coordinates, preferably > command line? > > Or is the transform itself easily found? > > Thanks again. > > Regards, > > Don > > Don Krieger, Ph.D. > > Department of Neurological Surgery > > Universityof Pittsburgh > > (412)648-9654 Office > > (412)521-4431 Cell/Text > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
