please don't count on the T2 and FLAIR options doing the same thing as I suspect that they won't in the near future!

Bruce
On Wed, 30 Jul 2014, Satrajit Ghosh wrote:

thanks matt,
would like to be sure that your comments in relation to the T2-space-flair
sequence and not the typical clinical TSE-FLAIR. is that the case?

cheers,

satra


On Wed, Jul 30, 2014 at 2:23 PM, Matt Glasser <m...@ma-tea.com> wrote:
      Bruce has said the FLAIR might be a little better for FreeSurfer
      but it’s worse for myelin maps (has less CNR for the myelin,
      though you can still see the major areas).  Currently, the T2
      and FLAIR flags do exactly the same thing, so it doesn’t even
      matter what flag you use.  I think it depends on what else you
      might want to do with the data (i.e. if myelin maps were
      important to your study you might go with T2w (like HCP), but if
      lesion detection were more important you might go with FLAIR
      (like biobank).  

Peace,

Matt.

From: Satrajit Ghosh <sa...@mit.edu>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Wednesday, July 30, 2014 at 1:01 PM
To: Freesurfer Mailing List <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] T2-space vs T2-space-FLAIR

hi bruce,
is there any difference from freesurfer's perspective of using
T2-space or T2-space-flair?

cheers,

satra

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