I all!
I have the same problem in about 15% of MRI scans, all made with the same
scanning protocol (T1 MPRAGE in a SIEMENS Avanto 1,5 T) during the
recon-all -all process.
I can't recognize any difference between those scans which work correctly
and those not.
I have never found the same error on 3T MRI scans.
I've already tried to add these flags to the recon-all -all command:
-use-mritotal
-talairach -use-mritotal
-notalairach
but I've always received an error message
Thank you very much
ERROR: mpr2mni305 failed, see transforms/talairach_avi.log
Darwin pro-di-villani.besta.local 13.3.0 Darwin Kernel Version 13.3.0: Tue
Jun 3 21:27:35 PDT 2014; root:xnu-2422.110.17~1/RELEASE_X86_64 x86_64
Thanks for your attention
Francesco Deleo
Milan, Italy
---------------------------------------------------------------------
FREESURFER_HOME: /Applications/freesurfer
Build stamp: freesurfer-Darwin-lion-stable-pub-v5.3.0
Kernel info: Darwin 13.3.0 x86_64
---------------------------------------------------------------------
LAST LINES IN TALAIRACH_AVI.LOG
parameters
9.0270 134.9373 110.8627 -84.3566 -7.5458 -11.3475
eta,q 0.95791 3.72402
0.0485 0.0470 0.0477 0.0513 0.0470 0.0452
0.0475 0.0471 0.0478 0.0513 0.0457 0.0435
0.0472 0.0472 0.0476 0.0428 0.0434 0.0415
0.0471 0.0471 0.0476 0.0435 0.0430 0.0415
0.0470 0.0478 0.0457 0.0525 0.0415 0.0430
0.0473 0.0511 0.0430 0.0548 0.0442 0.0453
0.0486 0.0426 0.0406 0.0672 0.0431 0.0503
niter,ni,del,rscale 7 3 12.0000 1.2000
imgrege: no voxels in register
ERROR: 'imgreg_4dfp
/Applications/freesurfer/average/711-2C_as_mni_average_305
/Applications/freesurfer/average/711-2B_as_mni_average_305_mask
talsrcimg_g11 none talsrcimg_to_711-2C_as_mni_average_305_t4 1283' failed!
status=254
ERROR: mpr2mni305 execution aborted
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