Hey Doug -- I ended up doing something like this, which worked:
labl_load rh.G_and_S_paracentral.label ; labl_set_color 0 255 255 0 labl_load rh.G_front_inf-Opercular.label ; labl_set_color 1 255 255 15 labl_load rh.G_insular_short.label ; labl_set_color 2 255 255 30 labl_load rh.G_occipital_sup.label ; labl_set_color 3 255 255 45 labl_load rh.G_oc-temp_med-Lingual.label ; labl_set_color 4 255 255 60 On 4/4/14, 15:50 , Douglas N Greve wrote: > > You can use mris_label2annot to create an annotation and then control > the colors via the ctab > doug > > On 04/03/2014 09:13 AM, Rudolph Pienaar wrote: >> Hi all -- >> >> I have a process that generates a list of ROIs (from aparc.annot) based >> on some cost condition. I wanted to view these labeled ROIs in >> 'tksurfer'. I created the following rough tcl script: >> >> 'label_load.tcl' >> >> set label lh.bankssts.label ; read_and_color_labeled_vertices 255 255 0 >> set label lh.caudalanteriorcingulate.label ; >> read_and_color_labeled_vertices 255 255 10 >> set label lh.caudalmiddlefrontal.label ; read_and_color_labeled_vertices >> 255 255 20 >> set label lh.cuneus.label ; read_and_color_labeled_vertices 255 255 30 >> set label lh.inferiorparietal.label ; read_and_color_labeled_vertices >> 255 255 40 >> set label lh.lateraloccipital.label ; read_and_color_labeled_vertices >> 255 255 50 >> >> and then ran with >> >> tksurfer <subj> <hemi> <surface> -tcl label_load.tcl >> >> The labels all load, but they are all the same teal-like color. I'm >> guessing that I am using the wrong tksurfer internal command... I have >> looked through the wiki, but didn't immediately see a solution. >> >> Help? >> >> Best >> -=R >> > -- Rudolph Pienaar, M.Eng, D.Eng / email: rudo...@nmr.mgh.harvard.edu MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging 149 (2301) 13th Street, Charlestown, MA 02129 USA _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
