You can use mris_label2annot to create an annotation and then control the colors via the ctab doug
On 04/03/2014 09:13 AM, Rudolph Pienaar wrote: > Hi all -- > > I have a process that generates a list of ROIs (from aparc.annot) based > on some cost condition. I wanted to view these labeled ROIs in > 'tksurfer'. I created the following rough tcl script: > > 'label_load.tcl' > > set label lh.bankssts.label ; read_and_color_labeled_vertices 255 255 0 > set label lh.caudalanteriorcingulate.label ; > read_and_color_labeled_vertices 255 255 10 > set label lh.caudalmiddlefrontal.label ; read_and_color_labeled_vertices > 255 255 20 > set label lh.cuneus.label ; read_and_color_labeled_vertices 255 255 30 > set label lh.inferiorparietal.label ; read_and_color_labeled_vertices > 255 255 40 > set label lh.lateraloccipital.label ; read_and_color_labeled_vertices > 255 255 50 > > and then ran with > > tksurfer <subj> <hemi> <surface> -tcl label_load.tcl > > The labels all load, but they are all the same teal-like color. I'm > guessing that I am using the wrong tksurfer internal command... I have > looked through the wiki, but didn't immediately see a solution. > > Help? > > Best > -=R > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
