Hi Ruthger! Use mris_expand to create a surf inside or outside of white
e.g. mris_expand surf/lh.white -1 surf/lh.white_1mm_inside # use positive values for outside ?h.white border mris_expand -thickness surf/lh.white -1 surf/lh.white_in100%_thickness # this samples in % of GM thickness, use positive values for outside white Cheers! Markus 2014-04-03 16:24 GMT+02:00 Righart, Ruthger <righ...@lrz.tu-muenchen.de>: > Hi All, > > mri_vol2surf has the flags --projfrac and --projdist. If I understand > these flags correctly, the volume is sampled inbetween the white-matter > surface and the pial surface (for ex. --projfrac 0.5 is midway). Is > there a possibility in tkmedit/Freeview to display with a colored line > for ex. --projfrac 0.5 for a given subject? (actually similar to what > was done by Salat et al., NeuroImage 2009, 48, p23, fig 1A, > http://surfer.nmr.mgh.harvard.edu/pub/articles/salat_2009.pdf). > > Thank you very much in advance for your help! > > All the best, > > Ruthger > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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