Ciao Francesco - The problem is that the pre-processing encountered an
error, so parts of it didn't actually complete:
Image Exception : #22 :: ERROR: Could not open image /path/to/mni_template
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
You can comment out that line on your configuration file so that it'll
find the default template. You don't need to repeat any pre-processing
steps before the inter-subject registration (see wiki page for how to turn
off steps). You also don't need to rerun bedpost.
Hope this helps,
a.y
On Wed, 18 Dec 2013, Francesco Baldacchini wrote:
Ciao Anastasia,
Here is the log file you requested. Thanks
Francesco Baldacchini
2013/12/17 Anastasia Yendiki <ayend...@nmr.mgh.harvard.edu>
Hi Francesco - Can you please send us your tracula log file,
from scripts/trac-all.log? It's impossible to guess what went
wrong without seeing the log file.
Thanks,
a.y
On Tue, 17 Dec 2013, Francesco Baldacchini wrote:
Hi everybody,
I'm having problems running the trac-all -path
command. It's giving me this
error:
Segmentation fault (core dumped)
Linux opbg 3.11.0-15-generic #23-Ubuntu SMP Mon Dec
9 18:17:04 UTC 2013
x86_64 x86_64 x86_64 GNU/Linux
trac-paths exited with ERRORS at mar 17 dic 2013,
16.09.33, CET
I searched but it seems I'm the only one getting
this error. To give you
more information I can show you how the trac-all
-bedp command ended, to me
it seems without error:
59 slices processed
61 slices processed
Queuing post processing stage
/usr/local/freesurfer/bin/bedpostx_mgh: line 439:
5294
Terminated
${subjdir}.bedpostX/monitor
In attachment I loaded my drirc.tutorial
configuration file. Thanks,
Francesco Baldacchini
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