Dear Bruce, Thanks for your precious promt. All the best. 2013-11-22
Rujing Zha 发件人：Bruce Fischl <fis...@nmr.mgh.harvard.edu> 发送时间：2013-11-21 22:42 主题：Re: [Freesurfer] recon-all Process Flow 收件人："Rujing Zha"<charujing...@163.com> 抄送："freesurfer"<freesurfer@nmr.mgh.harvard.edu> Hi Rujing sure, you can run them individually if you want. Just make sure it is in the right order and you don't skip any or they will fail cheers Bruce On Thu, 21 Nov 2013, Rujing Zha wrote: > Dear all, > As we know, recon-all is a integrated code. I have read this code process > flow in the website > http://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable. Can I run the a > series of command which are presented in command line step by step to > realize all the function of recon-all? > All the best. > > 2013-11-21 > > ____________________________________________________________________________ > Rujing Zha > > ____________________________________________________________________________ > ????"Rujing Zha"<charujing...@163.com> > ?????2013-11-21 22:30 > ???Re:[Freesurfer] recon-all -s subjects -all unexpected termination > ????"freesurfer"<freesurfer@nmr.mgh.harvard.edu> > ??? > > Dear professor Bruce, > Thanks for your precious prompt. I will try it. > All the best. > Rujing Zha > > > ____________________________________________________________________________ > ????Bruce Fischl <fis...@nmr.mgh.harvard.edu> > ?????2013-11-21 21:39 > ???Re:[Freesurfer] recon-all -s subjects -all unexpected termination > ????"Rujing Zha"<charujing...@163.com> > ???"freesurfer"<freesurfer@nmr.mgh.harvard.edu> > > Hi Rujing > > run: > > recon-all -s <subject> -make all > > that will figure out what needs to be rerun and do so. > > cheers > Bruce > On Thu, 21 Nov 2013, > Rujing Zha wrote: > > > Dear all, > > I have run recon-all for some subjects,but this code is unexpected > > terminated before it normally end. Can I run the code agian directly with > out > > deleting some outputs obtained from recon-all? That is to say, part of > > recon-all outputs do exist(as I have run recon-all previously), then > > recon-all new output will overwrite the existing files when I run recon-a > ll > > again? > > All the best. > > > > 2013-11-21 > > > > _________________________________________________________________________ > ___ > > Rujing Zha > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it i > s > addressed. If you believe this e-mail was sent to you in error and the e-ma > il > contains patient information, please contact the Partners Compliance HelpLi > ne at > http://www.partners.org/complianceline . If the e-mail was sent to you in e > rror > but does not contain patient information, please contact the sender and pro > perly > dispose of the e-mail. > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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