you need to run specify -qcache on the recon-all command line. You should
be able to just run it now that -all has finished and it will be pretty
fast.
cheers
Bruce
On Wed, 14 Aug 2013, Muhammad Naveed Iqbal Qureshi wrote:
Dear List Members,
I converted my data from .dcm to .nii and than from .nii to .mgz volume,
after that I have run the following command to calculate the cortical
thickness;
recon-all -s sub01 -all
but I have not get ".thickness.fwhm15.fsaverage.mgh" files in the surf
folder after recon-all get finished without errors.
Please tell me the reason of the absence of these files.
Previously I did not converted my data to .nii and I got all the files in
surf folder. I used the following command earlier
recon-all -i <path-to-dicom> -subject <name-of-the-subject> -all -qcache &
waiting for reply
Best Regards,
Muhammad Naveed Iqbal Qureshi
P please don't print this e-mail unless you really need to
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