No, not that. That is the density reestimation. Later on it should write out the log posterior
On Jun 25, 2013, at 3:32 PM, Dov Sadan <dov.sadan...@gmail.com> wrote: > Dear Buche, > > Thank you very much for your quick reply. > > Do you mean those lines: (from recon-all. log) > ================== > . > . > . > gca peak = 0.27536 (62) > mri peak = 0.11940 (97) > Right_Hippocampus (53): linear fit = 1.55 x + 0.0 (325 voxels, overlap=0.000) > Right_Hippocampus (53): linear fit = 1.55 x + 0.0 (325 voxels, peak = 96), > gca=96.1 > . > . > > =================== > > If this is what you meant, can you shed some light on this log. What "gca > peak" / "mri peak" means? And what the number insight the parentheses > represent ? > > Thanks in advance, > Assaf > > > > > On Tue, Jun 25, 2013 at 9:49 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> > wrote: > Hi Dov > > I think it writes out the log posterior at each iteration of the aseg > (mri_ca_label) > > cheers > Bruce > > On Tue, 25 Jun 2013, Dov Sadan wrote: > > Hi there, > > I'm wondering if there's any parameter which can assess the correctness of > the freesurfer's segmentation ( the aparc.a2009s+aseg.mgz file). > > --> Assuming the freesurfer's algorithm fitting/minimizing an objective > function, right ? If so, where I can find the value of this > fitted function ? (or RMS value ?) > > Thanks in advance, > Dov > > > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
