Can you send me the terminal output in a text file? A word doc is very inconvenient:). doug
On 05/28/2013 01:38 PM, Fotiadis, Panagiotis wrote: > Hi Doug, > > 1) My cmd line is: > > mri_glmfit --y lh.Diseased_gender_age.thickness.10B.mgh --fsgd > Diseased_gender_age.fsgd dods --C CAA_male-vs-female_age_slope.mtx --C > CAA_male-vs-female.mtx --C CAA-vs-Control_age_slope.mtx --C > CAA-vs-Control.mtx --C Males-vs-Females_age_slope.mtx --C > Males-vs-Females.mtx --surf fsaverage lh --cortex --glmdir > lh.Diseased_gender_age.glmdir > > 2) The FS version that I am using is the stable 5.0.0, > > 3) I have attached the full terminal output in this email. > > Thank you for your time! > Panos > ________________________________________ > From: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas Greve > [gr...@nmr.mgh.harvard.edu] > Sent: Monday, May 27, 2013 10:08 PM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] Correction for multiple comparisons error > > what is your cmd line? What version of FS are you using? What is the > full terminal output? > doug > > > On 5/25/13 6:55 PM, Fotiadis, Panagiotis wrote: >> Hi! >> >> I have been running the mri_glmfit-sim command to do the correction for >> multiple comparisons for my group analysis and for some voxel-based >> thresholds (not all) there is an error that comes up when reading the >> colortable from the annotation file: >> >> reading colortable from annotation file... >> colortable with 35 entries read (originally >> /space/amaebi/26/users/buckner_cortical_atlas/scripts/colortable_final.txt) >> *** glibc detected *** mri_surfcluster: malloc(): memory corruption: >> 0x0000000006e61230 *** >> *** glibc detected *** mri_surfcluster: malloc(): memory corruption: >> 0x0000000006e61230 *** >> >> and then it gets stuck. Do you happen to know what might be causing this >> issue? >> >> Thank you for your time, >> Panos >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
