Thanks for the quick reply. Can you elaborate a little bit how to use mri_vol2vol to get what I want? what would be the final scipt for tkmedit then?
On Tue, Mar 5, 2013 at 5:31 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>wrote: > Hi Natalie > > sorry, tkmedit won't do what you want. It's old and we are not developing > it anymore. You can apply the transform using mri_vol2vol, just make sure > to use nearest nbr interp for the aseg. > > cheers > Bruce > > On Tue, 5 Mar 2013, Natalie Han wrote: > > Hi, all, >> I have a tkmedit display issue when I try to add transformation to the >> main >> volume, but the segmentation volume won't conform to Talairach domain >> accordingly. Here is the commandline >> >> tkmedit subject norm.mgz -main-transform talairach.xfm -seg aseg.mgz >> >> really appreciate any feedback on how to add transformation on this >> segmentation results. >> >> Thanks. >> Natalie >> >> >> > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. > If the e-mail was sent to you in error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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