It looks like it just started running too

On Jan 14, 2013, at 6:05 PM, Nick Schmansky <ni...@nmr.mgh.harvard.edu> wrote:

> Jon,
> 
> the log indicates that mri_em_register was running.  does 'top' show if
> mri_em_register is running?  it can take quite a while (upwards of 40
> minutes), and the log can sit unchanged for several minutes during the
> section shown in your log.
> 
> Nick
> 
> 
> On Mon, 2013-01-14 at 15:25 -0500, Jonathan Holt wrote:
>> In 5.0.0 I was used to dealing with brainmask.mgz files. in 5.2.0, I have so 
>> far been able to generate a T1.mgz, which to my eyes, looks OK. However, the 
>> resulting surf folder is empty and I'm not sure why. Log file attached. 
>> 
>> 
>> jon
>> 
>> 
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