Look like it is running out of memory. How much ram do you have on that machine? Bruce
On Nov 30, 2012, at 9:29 PM, Negar Memarian <negar.memar...@utoronto.ca> wrote: > Hello, > > I ran recon-all -all on my subject. The process ended after several minutes > with this message at the end: > recon-all -s 350_FS exited with ERRORS at Fri Nov 30 17:57:59 PST 2012 > > I tried loading the pial and white surfaces for editing using this command: > tkmedit 350_FS brainmask.mgz rh.white -aux-surface lh.white > > but looks like these surfaces do not exist (since the recon-all exited > prematurely). When I check the recon-all.log file I do not see any errors > except a few MCSRCH errors. So I cannot understand what exactly went wrong in > the recon-all. I've attached the recon-all log file. Can someone please tell > me what the problem is and how I can fix it? > > Many thanks, > Negar > p.s. I tried on more than one subject and I still face the same issue. > > > Negar Memarian, MASc, PhD > NSERC Postdoctoral Fellow > Department of Neurology > David Geffen School of Medicine at UCLA > > <recon-all.log> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
