Oh, sorry, you have an updated but buggy version of mri_segstats. Try the version here: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.linux
doug On 11/09/2012 12:44 PM, Angie Morales wrote: > Here is my log file. Thanks again. > > On Thu, Nov 1, 2012 at 5:04 PM, Angie Morales <ammora...@gmail.com > <mailto:ammora...@gmail.com>> wrote: > > Thanks for the reply. Unfortunately, disk space does not seem to > be the problem. > > > On Thu, Nov 1, 2012 at 1:43 PM, Angie Morales <ammora...@gmail.com > <mailto:ammora...@gmail.com>> wrote: > > I'm using Freesurfer version 5.1.0 and recon-all keeps exiting > with errors during the intensity correction step. The error > reads: > > Writing to ./tmp.mri_nu_correct.mni.24988/output.mean.dat > (standard_in) 1: syntax error > mris_calc -o ./tmp.mri_nu_correct.mni.24988/nu2.mnc > ./tmp.mri_nu_correct.mni.24988/nu2.mnc mul > Linux funcgrid3 3.1.10-1.16-desktop #1 SMP PREEMPT Wed Jun 27 > 05:21:40 UTC 2012 (d016078) x86_64 x86_64 x86_64 GNU/Linux > > recon-all -s 402_1 exited with ERRORS at Thu Nov 1 13:19:28 > PDT 2012 > > Any ideas about what might be going wrong? > > Thanks, > Angie > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
