Hi Angie, is that disk full? You can check with the df command doug On 11/01/2012 04:43 PM, Angie Morales wrote: > I'm using Freesurfer version 5.1.0 and recon-all keeps exiting with > errors during the intensity correction step. The error reads: > > Writing to ./tmp.mri_nu_correct.mni.24988/output.mean.dat > (standard_in) 1: syntax error > mris_calc -o ./tmp.mri_nu_correct.mni.24988/nu2.mnc > ./tmp.mri_nu_correct.mni.24988/nu2.mnc mul > Linux funcgrid3 3.1.10-1.16-desktop #1 SMP PREEMPT Wed Jun 27 05:21:40 > UTC 2012 (d016078) x86_64 x86_64 x86_64 GNU/Linux > > recon-all -s 402_1 exited with ERRORS at Thu Nov 1 13:19:28 PDT 2012 > > Any ideas about what might be going wrong? > > Thanks, > Angie > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
