Hi all, I'm trying to project volume BOLD time series to native surface in some subjects. First, I registered the functional data to orig.mgz, using:
bbregister --s subj --mov func.nii.gz --reg register.dat --init-fsl --bold --o output.nii.gz The results look good in tkregister2. Then, I want to go from volume to surf, doing: mri_vol2surf --mov functional.nii.gz --reg register.dat --regheader nmr00524_FS --hemi lh --o /folder/ However, it gives this error message: Done reading source surface Mapping Source Volume onto Source Subject Surface 1 0 0 0 using old Done mapping volume to surface Number of source voxels hit = 26361 Writing to /folder/ Dim: 132698 1 1 non-standard value for imnr1 (1, usually 256) in volume structure non-standard value for type (3, usually 0) in volume structure non-standard value for width (132698, usually 256) in volume structure non-standard value for height (1, usually 256) in volume structure I should probably use mri_vol2vol first, but which target volume should I then use? Or is there something else I'm doing wrong? Thanks for your help! -- Linda Douw, Ph.D. Research fellow Department of Radiology Athinoula A. Martinos Center for Biomedical Imaging Massachusetts General Hospital Harvard Medical School 149 13th Street Charlestown, MA 02129 _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.