Hi Doug.
The missing files are NOT in $FREESURFER_HOME/bin; So, I guess that's
why they are not found even though the path is set up in the system
PATH variable.
Suggestions?
Fidel
Are the missing files in $FREESURFER_HOME/bin and is that path in your
system PATH variable?
On 07/26/2012 01:29 PM, Fidel Vila wrote:
> Thanks for your prompt reply, Doug.
>
> I've been checking and following the wiki instructions with regards
to
> setting up proper paths, and I could not find an obvious (to me)
> problem there.
>
> I attach a file with things I have tried and issues I have found.
>
> Further advice will be greatly appreciate it.
>
> Many thanks,
>
> Fidel
>
>
>
>
>
> On 25-Jul-12, at 8:22 PM, Douglas Greve wrote:
>
>> did you set up your environment so that your path environment
>> variable has all the proper paths in it? Look at the wiki for
>> instructions.
>> doug
>>
>> On 7/25/12 7:57 PM, Fidel Vila wrote:
>>> Hi Freesurfer experts,
>>>
>>> I recently installed FS (PowerPC architecture version available on
>>> FS website) on a Mac OS X 10.4.11 and I get the attached output
>>> error when running recon-all.
>>>
>>> Advice on how to troubleshoot this would be appreciate.
>>>
>>> Thanks,
>>>
>>> Fidel
>>>
>>>
>>>
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>>
>> The information in this e-mail is intended only for the person to
>> whom it is
>> addressed. If you believe this e-mail was sent to you in error and
>> the e-mail
>> contains patient information, please contact the Partners Compliance
>> HelpLine at
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>>
>
>
>
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html
_______________________________________________
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Freesurfer@nmr.mgh.harvard.edu
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Fidel Vila-Rodriguez, MD, FRCPC
Clinical Assistant Professor, Faculty of Medicine, Dpt. of Psychiatry,
University of British Columbia
UBC Clinician Investigator Fellow
UBC Graduate Program in Neuroscience Ph.D Candidate
BC Mental Health and Addiction Research Institute
A3-128-4, 938 West 28th Ave
Vancouver, BC
V5Z 4H4
Tel: 604-875-2000 Ext. 4732
Fax: 604-875-3871
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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
