Hi Gabor,
If you run bedpostX on the data outside of tracula using the default
options, do you get the same error?
Priti
> Dear all,
>
> I've the following error right after starting trac-all -bedp -c
> configuration_file:
>
> Making bedpostx directory structure
> Queuing preprocessing stages
> [: 223: NONE: unexpected operator
> [: 314: NONE: unexpected operator
> [: 327: xbedpostx_pre: unexpected operator
> [: 486: x: unexpected operator
> [: 486: -le: argument expected
> Queuing parallel processing stage
> [: 223: NONE: unexpected operator
> 0 slices processed
> [: 327: xbedpostx: unexpected operator
> [: 486: x70: unexpected operator
> Queuing post processing stage
> [: 223: NONE: unexpected operator
> [: 314: NONE: unexpected operator
> [: 327: xbedpostx_post: unexpected operator
> [: 486: x: unexpected operator
> [: 486: -le: argument expected
>
>>From the created files it seems that the first error occurs at
> "preprocid=`${BPDIR}/fsl_sub_seychelles -T 60 -m a -N bedpostx_pre -l
> ${subjdir}.bedpostX/logs ${FSLDIR}/bin/bedpostx_preproc.sh ${subjdir}`"
>
> Any idea how to fix this error?
>
> Trac-all -prep finished without error.
> I've Freesurfer 5.1.0, Ubuntu 11.04 and FSL 4.1.8 installed using
> Neurodebian and I don't use SGE.
>
> I'd appreciate an early answer.
>
> Thanks,
> Gabor
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