Dear all,
I've the following error right after starting trac-all -bedp -c
configuration_file:
Making bedpostx directory structure
Queuing preprocessing stages
[: 223: NONE: unexpected operator
[: 314: NONE: unexpected operator
[: 327: xbedpostx_pre: unexpected operator
[: 486: x: unexpected operator
[: 486: -le: argument expected
Queuing parallel processing stage
[: 223: NONE: unexpected operator
0 slices processed
[: 327: xbedpostx: unexpected operator
[: 486: x70: unexpected operator
Queuing post processing stage
[: 223: NONE: unexpected operator
[: 314: NONE: unexpected operator
[: 327: xbedpostx_post: unexpected operator
[: 486: x: unexpected operator
[: 486: -le: argument expected
>From the created files it seems that the first error occurs at
"preprocid=`${BPDIR}/fsl_sub_seychelles -T 60 -m a -N bedpostx_pre -l
${subjdir}.bedpostX/logs ${FSLDIR}/bin/bedpostx_preproc.sh ${subjdir}`"
Any idea how to fix this error?
Trac-all -prep finished without error.
I've Freesurfer 5.1.0, Ubuntu 11.04 and FSL 4.1.8 installed using
Neurodebian and I don't use SGE.
I'd appreciate an early answer.
Thanks,
Gabor
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
