I think I got it, but it would be great if someone could tell me if
this is wright:

mris_anatomical_stats -l lh.cortex.label -t lh.pial_lgi -log file.txt
SUBJECT lh pial

thanks,

ines


On Tue, May 15, 2012 at 6:58 PM, Inês Violante <inesviola...@gmail.com> wrote:
> Dear all,
>
> How can I obtain an average lGI for each subject's hemipshere?
>
> I've tried:
>
> mris_anatomical_stats -mgz -f
> lh.lgi.stats -b -a ../label/lh.aparc.annot -c ../label/
> lgi.annot.ctab -t  pial_lgi
> $SUBJECT lh
>
> but I had the following error:
>
> ERROR: stating file .../label/lh.aparc.annot
>
> It calculates the lgi for each gyri label but it does not give average
> values for the hemisphere.
>
> Thanks a lot.
>
> ines

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