Hi Kiley, you should not have to change anything. matlab just needs to be in your path. When you open a terminal and type: which matlab what do you get? doug
Kiley wrote: > > > Begin forwarded message: > >> *From: *Kiley <kiley_seym...@yahoo.com.au >> <mailto:kiley_seym...@yahoo.com.au>> >> *Date: *January 13, 2012 1:17:04 PM GMT+01:00 >> *To: *freesurfer@nmr.mgh.harvard.edu >> <mailto:freesurfer@nmr.mgh.harvard.edu> >> *Subject: **Re: matlab: No MATLAB bin directory for this machine >> architecture.* >> >> Hi Freesurfers >> >> I have just begun using Freesurfer (and the mac terminal) to do my >> retinotopic mapping. So far I have found the reconstruction and >> pre-analysis to be far superior than anything I have used before. >> However, I am now at the stage of running the selxavg3-sess command ( >> selxavg3-sess -a rtopy.self.lh -s IFEE2211 -no-preproc ) and I am >> getting the following error. I googled the error and found a post >> that says I must change a line in the selxavg3-sess script so that my >> 32bit version of MATLAB can be used, but I am not very familiar with >> the files formats used and my attempts to change them in order to >> successfully progress have been futile. Your help for such a 'basic >> user' question will be very much appreciated. Thanks in advance! >> >> Kiley >> >> [labs-MacBook-Pro:fmri/retmapping/fsRetinotopy] kiley% selxavg3-sess >> -a rtopy.self.lh -s IFEE2211 -no-preproc >> >> Surface data self lh >> -------------------------------------------------------------- >> selxavg3-sess logfile is >> /Users/kiley/fmri/retmapping/fsRetinotopy/log/selxavg3-sess-bold-rtopy.self.lh-120113110658.log >> -------------------------------------------------------------- >> ------------------------------------------- >> /Users/kiley//fmri/retmapping/fsRetinotopy/IFEE2211 >> Fri Jan 13 11:06:59 CET 2012 >> anadir = /Users//fmri/retmapping/fsRetinotopy/IFEE2211/bold/rtopy.self.lh >> DoGLMFit = 1 >> DoContrasts = 1 >> UpdateNeeded = 1 >> ------------------------------------------ >> ------- matlab output -------------------- >> >> matlab: No MATLAB bin directory for this machine architecture. >> >> ARCH = maci64 >> >> ------------------------------------------ >> ERROR: fast_selxavg3() failed\n > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
