Hi Knut - What are the permissions of this file? One thing you could try is to run bedpostx on /media/Elements/freesurfer/dti/1/dtsave/1/dmri directly from the command line instead of through trac-all and see if that works (monitor is a script that bedpostx launches that prints to the screen the number of slices that have been processed).
a.y On Fri, 19 Aug 2011, Knut J Bjuland wrote: > Hi > > I have started to run tracula on my own data. However when I run the > second stage I get this erros bedpostx_seychelles: line 260: > /media/Elements/freesurfer/dti/1/dtsave/1/dmri.bedpostX/monitor: > Permission denied. I have tried running is as root as well but it did > not help. Is there anything I can do to bypass thiss error. I am using > Fedora 15. > > Knut J > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
