Hi Jordi where did your dicoms come from?
Bruce On Tue, 28 Jun 2011, Jordi Casals wrote:
Hello, My name is Jordi Casals. I've been trying to process some subjects with recon-all, but the procees is giving me this error: SUBJECT DFF_082 DATE Tue Jun 28 16:58:40 CEST 2011 USER neuro HOST td547.pic.es PROCESSOR x86_64 OS Linux Linux td547.pic.es 2.6.18-238.9.1.el5 #1 SMP Tue Apr 12 18:53:46 EDT 2011 x86_64 x86_64 x86_64 GNU/Linux $Id: recon-all,v 1.313.2.6 2010/08/04 15:50:56 nicks Exp $ /SOFTWR/freesurfer5/bin/recon-all PWD $PATH/DFF_082 CMD mri_convert /DICOM/T13D/DFF_082/DFF_082_0002 $PATH/DFF_082/mri/orig/001.mgz and the recon-all log have the following lines: mri_convert /DICOM/T13D/DFF_082/DFF_082_0002 $PATH/DFF_082/mri/orig/001.mgz $Id: mri_convert.c,v 1.166.2.2 2010/08/10 19:11:50 greve Exp $ reading from /DICOM/T13D/DFF_082/DFF_082_0002... Starting DICOMRead2() dcmfile = /DICOM/T13D/DFF_082/DFF_082_0002 dcmdir = /DICOM/T13D/DFF_082 WARNING: tag ImageNumber not found WARNING: tag image orientation not found Ref Series No = 301 ERROR: bits = 0 not supported. Send email to freesurfer@nmr.mgh.harvard.edu Linux td547.pic.es 2.6.18-238.9.1.el5 #1 SMP Tue Apr 12 18:53:46 EDT 2011 x86_64 x86_64 x86_64 GNU/Linux recon-all -s DFF_082 exited with ERRORS at Tue Jun 28 16:58:40 CEST 2011 I searched for possible solutions but some of them I don't really understand what I really have to do and the other solutions didn't seem to work. I don't know how to correct the error to reach the complete execution of the process. If someone can help me or guide me to the solution, I would be very grateful. Thank you, Jordi.
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