Hi Maria, I've tested the files you sent me and were able to replicate the problem. Will work on it asap. Sorry about the delay.
Ruopeng On 06/27/2011 12:13 PM, iac...@nmr.mgh.harvard.edu wrote: > Hi all, > > I haven't had any answer to my post, so I give another try. Hope it > doesn't bother you. > > I am trying to overlay a map on a specific subcortical structure (the > caudate). > > -I obtained the surface of the structure using the command: > > mri_tessellate structure.nii.gz 1 lh.structure.surf > > -then I projected my map on the surface using: > > mri_vol2surf --mov map.nii --regheader structure --hemi lh --surf > structure.surf --projdist 0 --fwhm 5 --out projected_map.mgz --interp > trilinear > > Everything seems to work properly. I am able to see the result using > tksurfer. > > However, when I try to overlay projected_map.mgz on lh.structure.surf > using freeview I experience a segmentation fault issue. > It seems that the software looks for the WM, the pial, the curv, etc > surfaces. > Obviously I don't have these information, since I am projecting the map > only on the caudate nucleus. > > Is it mandatory to have these inputs? Could you give me an advice about that? > > > Thanks > Maria > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
