When using MEMPR images (Van der Kouwe et al., 2008) in the longitudinal processing stream, when should the dura correction (mris_makes_surfaces -dura) be ran? After the first cross-sectional run of recon-all, after the final longitudinal run of recon-all, or maybe both?
I have the same question with respect to the "-hippo-subfields" flag. Should this flag be specified on each run of recon-all in the longitudinal processing stream? Thanks, -Adam
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