Hi Gabriel

you cut the patch out in tksurfer first, then call mris_flatten. For 
small patches such as occipital ones we typically use the -complete 
option these days which minimizes the complete distance distortion matrix.

cheers
Bruce


On Fri, 20 May 2011, Gabriel Go.Es. wrote:

>
> Dear FreeSurfers
>
> I'm wondering about the flattenning options of FS I've saw that the 
> "mris-flatten" command does the trick but, it asks for a patch, my questions 
> are: can I flat any cortical region? and, how do I create a patch to 
> mris_flatten?
>
> Thanks in advanced,
> Gabriel
>
>
>
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