After you've gone into MNI space with all of your subjects, then visualizing the results on the surface are of questionable value. If you just want to take a peek, then it's not a big deal, but I would not recommend reporting them in a publication. If your results are in the mni152 space, you can try
tksurfer fsaverage lh inflated -aparc -mni152reg yourfile.img doug Andrew Jahn wrote: > Hello, > > I have second-level results in .img/.hdr format that I have just run > through SPM. I was wondering whether there is a way to visualize > these results onto a template FreeSurfer surface model in MNI space. > Is this possible, or can you only visualize second-levels which have > been processed through FreeSurfer? > > > Thanks, > > -Andrew > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
