Hi Madhura, I'm not sure I understand. The ?h.white is the boundary. If you want to create a voxel representation of it you can use mris_fill
cheers Bruce On Wed, 15 Dec 2010, Ingalhalikar, Madhura wrote: > Bruce and Allison, > Thanks for your prompt reply. For me wmparc.mgz is not entirely the correct > solution. I just need the labeled WM boundary (ribbon) to seed my fiber > tracking. So basically I will have to compute the boundary from wmparc.mgz. > Is there anything that does that already? > Thanks, > Madhura > > > -----Original Message----- > From: Bruce Fischl [mailto:fis...@nmr.mgh.harvard.edu] > Sent: Fri 12/10/2010 8:13 PM > To: Ingalhalikar, Madhura > Cc: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] WM parcelleted boundary > > Hi Madhura, > > have you looked at the wmparc.mgz? It might be exactly what you want > > Bruce > > On > Fri, 10 Dec 2010, Ingalhalikar, Madhura wrote: > >> Hi, >> >> Is there a way to get the cortical parcellations projected onto the WM >> boundary? I need to seed the boundary of the cortical ROI ( in WM) for fiber >> tracking. >> Please let me know, >> >> Thank you, >> Madhura >> >> >> The information contained in this e-mail message is intended only for the >> personal and confidential use of the recipient(s) named above. If the reader >> of this message is not the intended recipient or an agent responsible for >> delivering it to the intended recipient, you are hereby notified that you >> have received this document in error and that any review, dissemination, >> distribution, or copying of this message is strictly prohibited. If you have >> received this communication in error, please notify us immediately by >> e-mail, and delete the original message. >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > > > > The information contained in this e-mail message is intended only for the > personal and confidential use of the recipient(s) named above. If the reader > of this message is not the intended recipient or an agent responsible for > delivering it to the intended recipient, you are hereby notified that you > have received this document in error and that any review, dissemination, > distribution, or copying of this message is strictly prohibited. If you have > received this communication in error, please notify us immediately by e-mail, > and delete the original message. > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
