mri_vol2surf is the right command. Have you looked at the help for it? You can get it by running
mri_vol2surf --help I think tksurfer uses a projfrac of 0 and nearest neighbor interpolation. You can load the result directly into tksurfer to see if it looks the same. doug Xinian Zuo wrote: > Dear surfers, > > Hi, I used freeesurfer to visualize my volume from FEAT outputs on the > surface in the way: > > tksurfer fsaverage rh inflated_pre -overlay data.nii.gz -mni152reg > > , then save surface overlay as a mgh file. My question is, how can I > get the identical mgh data by using a command line without launching > the tksurfer gui? I found there is a command mri_vol2surf, but not > sure about these default settings in tksurfer gui. Really appreciate > it if some know and like to give your suggestions. > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
