there's a tutorial for this on the wiki. It's pretty detailed - let us
know if you have any problems.
cheers
Bruce
On Tue, 4 May 2010, Antoine Leflon wrote:
No I haven't , what is the syntax for this ?
tkregister2 (name) (mgz file) ?
thanks ,
Antoine
________________________________________________________________________________
Bruce Fischl <fis...@nmr.mgh.harvard.edu> a écrit :
have you visually verified the talairach failed with tkregister2? If you
bring up the orig.mgz does it show properly (that is, is the view it calls
coronal actually coronal, etc...)?
On Tue, 4
May 2010, Antoine Leflon wrote:
Hi all ,
I've used data from another Doctor , freesurfer told me the FOV was
330 so I put the flag -cw256 in the command recon-all but the
Talairach just failed ...
I got this error message . Can someone explain please ?
________________________________________________________________________________
#...@# Talairach Failure Detection Tue May 4 12:31:55 IST 2010
/home/cami/freesurfer/subjects/a1/mri
talairach_afd -T 0.005 -xfm transforms/talairach.xfm
ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm
***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050)
Linux pride 2.6.31-14-generic #48-Ubuntu SMP Fri Oct 16 14:04:26 UTC
2009 i686 GNU/Linux
recon-all exited with ERRORS at Tue May 4 12:31:55 IST 2010
________________________________________________________________________________
thanks ,
Antoine
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