mri_convert can be used to change the format, assuming it is standard dicom.
cheers Bruce On Tue, 4 May 2010, Antoine Leflon wrote: > My files are dicoms and have no extension in the end of their name > (IM_0465 for example) . Is it possible to change the format ? > > thanks , > > Antoine > > > ________________________________________________________________________________ > > Talairach is about orientation. What is the format of your file? If it > is .hdr and.img, it will fail. > > > On 4 May 2010 11:43, Antoine Leflon > <antoine1.lef...@etudiant.univ-lille1.fr> wrote: > > Hi all , > > I've used data from another Doctor , freesurfer told me the FOV was > 330 so I put the flag -cw256 in the command recon-all but the > Talairach just failed ... > I got this error message . Can someone explain please ? > ________________________________________________________________________________ > > #...@# Talairach Failure Detection Tue May 4 12:31:55 IST 2010 > /home/cami/freesurfer/subjects/a1/mri > > talairach_afd -T 0.005 -xfm transforms/talairach.xfm > > ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm > ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050) > Linux pride 2.6.31-14-generic #48-Ubuntu SMP Fri Oct 16 14:04:26 UTC > 2009 i686 GNU/Linux > > recon-all exited with ERRORS at Tue May 4 12:31:55 IST 2010 > ________________________________________________________________________________ > > thanks , > > Antoine > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you > in error > but does not contain patient information, please contact the sender > and properly > dispose of the e-mail. > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
