Do I need convert the .label file to an annotation file before I run
mris_anatomical_stats?
Could I get the same results if I do something like this:
1. create the label file, and load it using MATLAB,
2. find the corresponding ID of vertices I clicked.
3. load .thickness file using matlab
4. find the corresponding thickness value of these vertice
5. compute the mean
Thanks!
Thank!
Guang
> Date: Wed, 24 Mar 2010 16:15:35 -0400
> From: fis...@nmr.mgh.harvard.edu
> To: freesurfer...@hotmail.com
> CC: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] the thickness of manually selected vertex
>
> Q1: yes.
> Q2: do you want each of them individually or the average? You can save a
> label file of the 4 vertices and use mris_anatomical_stats to get the
> average
>
> cheers
> Bruce
>
> On Wed, 24 Mar 2010, Guang Zeng wrote:
>
> >
> > Hi, there,
> >
> > I have two questions about the ?h.thickness file.
> >
> > If I load a subject's surface ?h.inflated using tksurfer, then I load its
> > thickness file ?h.thickness,
> >
> > By clicking mouse on the surface, I can read the corresponding curvature
> > value of a specific vertex.
> >
> > Q1, Here, the value next to 'Curvature' is actually its thickness value,
> > right?
> > Q2, If I select four vertexes on the surface, is there a way that I can
> > save the thickness values of these four vertexes into a txt file?
> >
> >
> > Thanks!
> > Guang
> >
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