Hi Andreas,

what version are you running? The 32 and 64 bit versions will definitely 
have differences - it's unavoidable. In the newest version we did eliminate 
some of the randomness that reduced reproducibility though.

Bruce

On Sat, 13 Feb 2010, Andreas Berger 
wrote:

> Hi Freesurfers,
>
> we have FreeSurfer running on 10 computers:
>
> 7 computers with suse 10  32bit, freesurfer 4.5.0 32bit
> 3 computers with debian 5 64bit, freesurfer 4.5.0 64bit
>
> recon-all -all -i finished on all of them without any errors, so i assumed 
> the best.
> out of curiousity i processed one of the subjects on both systems, and 
> checking the results in tkmedit and tksurfer i noticed that they are visibly 
> different. (thus in this case one of the surfaces does not look quite ok, 
> other subjects processed on that system look fine however, i haven't looked 
> through all of them yet). screenshots attached. also, i just started 
> recon-all -all -s bert on both systems, so i can compare them to the original 
> bert.
>
> what could be the reason for this failure at reproducibility?
>
>
>
>
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