In the mri_glmfit.log file, there is a "SearchSpace" this will be in mm2 for surfaces and mm3 for vols. There will also be a mask.mgh file. You can run mri_segstats on this to give you the number of elements that are == 1.
doug Stefan Brauns wrote: > Hi there, > > I am running surface based analysis of cortical thickness using > FreeSurfer. Sometimes I constrain the analysis to certain regions of > the brain, e.g. only frontal lobes. I would like to find out how many > vertices per hemisphere are analysed with the mri_glmfit I am running. > Is there a possibility to get these values from any of the log-files? > What is the usual number of vertices per hemisphere? > > Many thanks, > > Stefan > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
