When I type which getpwdcmd, I get: /apps/prod/i686/freesurfer-4.4.0/fsfast/bin/getpwdcmd And I checked, the file is there.
Anna 2009/11/17 Douglas N Greve <gr...@nmr.mgh.harvard.edu> > What happens when you type > > which getpwdcmd > > And can you see the file in $FREESURFER_HOME/fsfast/bin? > > Anna Rotarska-Jagiela wrote: > >> Dear Doug, >> thank you for your response. The path you named is added. Is there >> anything else we can check? >> Anna >> >> 2009/11/16 Douglas N Greve <gr...@nmr.mgh.harvard.edu <mailto: >> gr...@nmr.mgh.harvard.edu>> >> >> >> Try adding $FREESURFER_HOME/fsfast/bin to your path. >> >> >> doug >> >> Anna Rotarska-Jagiela wrote: >> > >> > >> > Dear Freesurfer Users, >> > during the creation of average brain with Freesurfer, I got the >> > following ERROR message: >> > > > getpwdcmd: command not found >> > > > ERROR: format for rh.orig.avg.area.mgh not recognized. >> > > > ERROR: make_average_surface >> > >> > do you have any idea what this might be? The Freesurfer version I'm >> > using is 4.4.0. I also attach the log file. >> > I would appreciate your help. >> > Sincerely, >> > Anna Rotarska-Jagiela >> > >> > >> > >> > -- >> > ------ >> > Dr. Anna Rotarska-Jagiela >> > Max Planck Institute for Brain Research >> > Department of Neurophysiology >> > Deutschordenstr. 46 >> > 60528 Frankfurt a.M. >> > Germany >> > Email: rotar...@mpih-frankfurt.mpg.de >> <mailto:rotar...@mpih-frankfurt.mpg.de> >> > <mailto:rotar...@mpih-frankfurt.mpg.de >> <mailto:rotar...@mpih-frankfurt.mpg.de>> >> > Phone: +49 69 6301 83782 >> > Fax: +49 69 6301 3833 >> > ------ >> > http://www.mpih-frankfurt.mpg.de/global/Np/Staff/rotarska.htm >> > ------ >> > >> >> ------------------------------------------------------------------------ >> > >> > _______________________________________________ >> > Freesurfer mailing list >> > Freesurfer@nmr.mgh.harvard.edu >> <mailto:Freesurfer@nmr.mgh.harvard.edu> >> >> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> >> >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >> >> FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> >> >> -- >> ------ >> Dr. Anna Rotarska-Jagiela >> Max Planck Institute for Brain Research >> Department of Neurophysiology >> Deutschordenstr. 46 >> 60528 Frankfurt a.M. >> Germany >> Email: rotar...@mpih-frankfurt.mpg.de <mailto: >> rotar...@mpih-frankfurt.mpg.de> >> >> Phone: +49 69 6301 83782 >> Fax: +49 69 6301 3833 >> ------ >> http://www.mpih-frankfurt.mpg.de/global/Np/Staff/rotarska.htm >> ------ >> > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > > -- ------ Dr. Anna Rotarska-Jagiela Max Planck Institute for Brain Research Department of Neurophysiology Deutschordenstr. 46 60528 Frankfurt a.M. Germany Email: rotar...@mpih-frankfurt.mpg.de Phone: +49 69 6301 83782 Fax: +49 69 6301 3833 ------ http://www.mpih-frankfurt.mpg.de/global/Np/Staff/rotarska.htm ------
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