Looks like that is a pretty weak computer. Can you run it on a stronger computer?
Rodrigo Zepeda wrote: > Hi, > > I'm getting an error trying to run a reconstruction. > > I'm working on multnomah and my subjects directory > is: /autofs/space/multnomah_002/users/Cashlab/ > > I'm using the following command: > > [multnomah:Cashlab] (nmr-std-env) recon-all -autorecon1 -autorecon2 > -subject MG25_SurferOutput -i > MG25/MRI/1.3.12.2.1107.5.2.30.26039.3.2007081618514610873067809.dcm > > > I get the following error: > > writing labeled volume to aseg.auto_noCCseg.mgz... > ERROR: opening pipe gzip -f -c > aseg.auto_noCCseg.mgz, errno = 12 > Cannot allocate memory > mri_ca_label: MRIwrite(aseg.auto_noCCseg.mgz) failed > > My environment information is: > > -------- freesurfer-Linux-centos4-stable-v4.5.0-20090823 -------- > Setting up environment for FreeSurfer/FS-FAST (and FSL) > FREESURFER_HOME /usr/local/freesurfer/stable4 > FSFAST_HOME /usr/local/freesurfer/stable4/fsfast > FSF_OUTPUT_FORMAT nii > SUBJECTS_DIR /autofs/space/multnomah_002/users/Cashlab > MNI_DIR /usr/local/freesurfer/stable4/mni > FSL_DIR /usr/pubsw/packages/fsl/current > > Any help will be appreciated! > > Thanks, > > Rodrigo > > ------------------------------------------------------------------------ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 In order to help us help you, please follow the steps in: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
