try recreating it (maybe you ran out of disk space?) On Fri, 14 Aug 2009, Rutvik Desai wrote:
> I get the same error when trying to load it in tksurfer. > > ----- > reading colortable from annotation file... > CTABreadFrom: could not allocate -2 bin table > Cannot allocate memory > Bus error > ----- > > On Aug 14, 2009, at 4:31 PM, Bruce Fischl wrote: > >> sounds like the annotation file is corrupted. Can you load it in >> tksurfer? >> On Fri, 14 Aug 2009, Rutvik Desai wrote: >> >>> We get the following error on one subject when running >>> mris_anatomical_stats. The same command workson other subjects who were >>> generated the same way. Using >>> freesurfer-Darwin-tiger-i686-stable-pub-v3.0.5, >>> also tried freesurfer-Linux-rh9-stable-pub-v3.0.5. No heavy processes were >>> running on the machine >>> that would prevent memory allocation. >>> >>> thanks, >>> Rutvik >>> >>> --------------------- >>> >>> % mris_anatomical_stats -a ep.1071/label/lh.aparc.annot -b -i 0.5 8 -f >>> ep.1071.lh.stats ep.1071 lh >>> >>> computing statistics for each annotation in ep.1071/label/lh.aparc.annot. >>> >>> only considering thicknesses in the range [0.5,8.0]. >>> >>> reading volume /usr/home/possing/pub/Epilepsy/ep.1071/mri/wm.mgz... >>> >>> Talairach transform >>> /home/mgolovin/fs_subjects/ep.1071/mri/transforms/talairach.xfm does not >>> exist ... >>> >>> Loading tal xfm file >>> /usr/home/possing/pub/Epilepsy/ep.1071/mri/transforms/talairach.xfm >>> >>> reading input surface >>> /usr/home/possing/pub/Epilepsy/ep.1071/surf/lh.white... >>> >>> reading input surface /usr/home/possing/pub/Epilepsy/ep.1071/surf/ >>> lh.pial... >>> >>> reading input surface >>> /usr/home/possing/pub/Epilepsy/ep.1071/surf/lh.white... >>> >>> done. >>> >>> computing second fundamental form...reading colortable from annotation >>> file... >>> >>> CTABreadFrom: could not allocate -2 bin table >>> >>> Cannot allocate memory >>> >>> Segmentation fault (core dumped) >>> > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
